12 Resources for

bioinformatics

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bioinformatics Hastens Drug Discovery and Development: Gene Logic Inc., a bioinformatics and biocontent firm in Gaithersburg, Md., is at the forefront of using highly sophisticated technologies to create genomic information-based research tools. To enable the free flow of critical information to its customers, Gene Logic uses information storage systems and software from EMC Corp., Hopkinton, Mass.,...; Tags: Reed Elsevier Inc., Bioinformatics, Healthcare; Case studies
CSIRO's Study in the Field of bioinformatics Has Been Propelled Forward With the Installation of a Dedicated High Performance Computing Cluster, Built Using Low Cost Dell Servers Clustered Together Running SuSe Linux: With thousands of scientists and researchers spread around the country, the CSIRO found itself faced with the challenge of consolidating its research platform onto a secure, centralised computing facility that could be easily accessed without limitation. With space limitations and operational costs a consideration, the CSIRO followed Dell's advice to...; Tags: Dell Computer Corp., Bioinformatics, High-performance Computing, High-performance, SuSE Linux, SuSE, CSIRO, Linux, Servers, Blade Servers, Open Source, UNIX, Utility Computing, Operating Systems, Software, Hardware; Case studies
Wyeth bioinformatics' Research Transformed Using HP and Red Hat Solution: Wyeth is a global leader in prescription pharmaceutical non-prescription consumer healthcare products and pharmaceuticals for animal health. Wyeth needed to identify a stable, scalable, and flexible architecture to facilitate innovation and meet the computational needs of scientific research, increase performance and productivity, and decrease operating costs. Wyeth embarked on a...; Tags: Wyeth, Hewlett-Packard Co., Red Hat Inc., Bioinformatics, Wyeth Bioinformatics, Vertical Industries, Healthcare, Benefits, Servers, Enterprise Software, Software, Human Resources, Hardware; Case studies
Dell and the Center of Excellence in bioinformatics at the University at Buffalo Create Linux-Based Clusters Running on Intel Processors and Dedicated to Cutting-Edge Research in bioinformatics: The newly formed Center of Excellence in Bioinformatics at the University at Buffalo UB, a campus of The State University of New York, combines such high-end technologies as supercomputing and visualization with scientific expertise in disciplines such as genomics, proteomics, and bioimaging. Because of the high costs of supercomputers, the...; Tags: Processor, Linux, Dell Computer Corp., Bioinformatics, University At Buffalo, Intel Corp., Healthcare; Case studies
CLC Sequence Viewer (exe): CLC Sequence Viewer is a free software workbench for basic bioinformatics, enabling users to make a large number of bioinformatics analyses, combined with smooth data management, and excellent graphical viewing and output options. Some of the many bioinformatics analyses are: Interactive restriction site analysis, Creating and editing alignments, Phylogenetics, Integrated...; Tags: Bioinformatics, CLC Sequence Viewer, Healthcare; Software downloads 2008-02-28

Biobar (5): A power browsing toolbar for biologists and bioinformatics people. You can add, replace, and change the searched databases and associated terms. This version is the first release on CNET Download.com.; Tags: Bioinformatics, Healthcare; Software downloads 2007-09-25
CLC Free Workbench (dmg): CLC Free Workbench creates a software environment enabling users to make basic bioinformatics analyses and smooth data management, combined with excellent graphical viewing and output options. Some bioinformatics features are: GenBank searching and viewing linear and circular views, Multiple alignment of DNA, RNA and proteins two alignment algorithms, advanced alignment...; Tags: Alignment, Protein, Bioinformatics, CLC Free Workbench, Healthcare, Biotechnology; Software downloads 2007-03-25
A Service-Oriented Data Integration and Analysis Environment for in Silico Experiments and bioinformatics Research: This paper presents present a practical experiment of building a service-oriented system upon current web services technologies and bioinformatics middleware. The system allows scientists to extract data from heterogeneous data sources and generate phylogenetic comparisons automatically. This can be difficult to accomplish using manual search tools since sequence data is...; Tags: Web, Bioinformatics, IEEE, Analysis, Healthcare; White papers 2006-11-16
Prova: Rule-Based Java Scripting for Distributed Web Applications: A Case Study in bioinformatics: Prova is a language for rule-based Java scripting to support information integration and agent programming on the web. Prova integrates Java with derivation and reaction rules supporting message exchange with various protocols. Prova supports transparent access to databases, retrieval of URLs, access to web services, and querying of XML documents....; Tags: Bioinformatics, Java, Web Application, Prova, Healthcare, Programming Languages, Software Development, Software/Web Development; White papers 2006-01-31
A WorkFlow Management System for bioinformatics Grid: To date, many bioinformatics tools are available to query and analyse biological data. These software are heterogeneous, support several kinds of data and the analysis of the produced results is often very difficult. Sometimes, it is needed to edit by hand the output, and adjust some values in order to...; Tags: Bioinformatics, Workflow Management, Tool, Healthcare, Productivity; White papers 2005-10-20
Performance Scalability of Data-Mining Workloads in bioinformatics: The bioinformatics workloads studied in this paper are representative of general-purpose data-mining techniques. They use BNs, SVMs, and DP, among other methods. They are data parallel workloads with large data sets and are very compute intensive. Data mining is the extraction of hidden predictive information from large data bases. Emerging...; Tags: Performance, Bioinformatics, Data Mining, Business Intelligence, Marketing Research, Databases, Healthcare, Enterprise Software, Software, Data Management, Marketing; White papers 2005-05-19
null: Hawkins is a visionary and must be stimulated! :)Just because he's pursuing something most of us can't easily grasp or understand, he mustn't be scolded or ridiculed. I have good reasons to feel that he's right somehow. I work with bioinformatics informatics applied to the biosciences and medicine and know...; Tags: HEALTHCARE, Hawkins; Discussion threads 2006-05-12

Additional Resources

CLC RNA Workbench (exe): CLC RNA Workbench--a bioinformatics program for advanced RNA sequence analysis. All analyses are fully integrated in one single, user-friendly, and intuitive software application. Version 2 improves functionalities of interactive restriction sites adds new actions, and includes better editing functions.; Tags: Software, Biotechnology, Tools & Techniques, Healthcare, Management; Software downloads 2008-01-10
Taverna (7): The Taverna project aims to provide a language and software tools to facilitate easy use of workflow and distributed compute technology within the eScience community. The best way to understand what Taverna is about and what it could potentially do for you is to use it, however, a quick read...; Tags: Workflow, Process Improvement, Quality, Business Operations; Software downloads 2008-01-04
Marking Enduring Associations With SAS Proteomics: Extracting Maximum Intelligence From Spectral Proteomic Data: This paper provides a high-level view of analysis management issues in metabonomic and protein biomarker research, what capabilities are required in an effective bioinformatics platform and how SAS Proteomics enables your organization to exploit this data for maximum value. SAS Proteomics - a component of SAS Scientific Discovery Solutions -...; Tags: SAS Institute; White papers 2005-02-01
Efficient Native Storage Systems for Semi-Structured Data: Semi-structured data is becoming commonplace with examples such as XML, Bioinformatics suffix-trees, scientific computing data, and even generic directory-file hierarchies. Such semi-structured data must be stored on mass storage devices for persistence as well as cost-efficiency. Current approaches, which map semi-structured data to relational databases or simply use flat files,...; Tags: Florida International University, Disk Drive, Storage Device, Storage System, Semi-Structured Data, Storage, Storage Management, Hardware; White papers
BlastStation (dmg): BlastStation is an interface program that makes BLAST Basic Local Alignment Search Tool searches faster and easier to use. BlastStation performs NCBI BLAST searches more than 10x faster than the regular sequential NCBI BLAST searches, with the innovative Dynamic Blast Accelerator DBA technology. BlastStation also performs WU-Blast2 searches using the...; Tags: Search, BlastStation, Storage, Databases, Servers, Hardware, Enterprise Software, Software, Data Management; Software downloads 2006-04-04
IBCP Leverages Scali Clustering Technology to Defeat Debilitating Diseases: The Institut de Biologie et Chimie des Proteines IBCP, located in Lyon France, is a research organization that focuses on understanding the sequence, structure and function of protein. Researching protein structure requires an enormous amount of data and compute power. IBCP currently has 2.6 TB data stored on its cluster....; Tags: Protein, Clustering, High-performance, IBCP, Leadership, Management; Case studies
BlastStation (msi): BlastStation is an interface program that makes BLAST Basic Local Alignment Search Tool searches faster and easier to use. BlastStation 2.31 performs NCBI BLAST searches more than 10x faster than the regular sequential NCBI BLAST searches, with the innovative Dynamic Blast Accelerator DBA technology. BlastStation also performs WU-Blast2 searches using...; Tags: Search, BlastStation, BlastStation 2.31, Storage, Databases, Servers, Hardware, Enterprise Software, Software, Data Management; Software downloads 2006-04-11
Will you be the "tech" in biotechnology?: What possibilities does the biotech industry hold for techies? Columnist Bob Weinstein gives an overview of how this industry is using high-tech workers.If science and words like “genome” and “genetic mutation” fire you up, check out opportunities in the biotechnology industry.With billions of dollars being poured into biotech research, there...; Tags: Bob Weinstein, biotechnology, biotech industry; Technical articles 2000-05-31

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